Homology Groups

Eukaryotic Promoter Database / Release 128

List of homology groups (see user manual):


Homology group 1: Maize alpha zeins 19 kd/22 kd multigene family

    + EP07003 Zm zein zA1_A
    - EP07004 Zm zein 19K
    - EP58002 Zm zein zA1_B
    - EP58003 Zm zein zA1_C
    - EP58014 Zm zein 19K C P1
    - EP58015 Zm zein 19K D P1

Homology group 2: Cereal high-MW seed storage proteins

    + EP26035 Ta LMW glutenin 1D1
    - EP14001 Hv hordein B1
    - EP14002 Ta a'/b'gliadin 1215
    - EP14003 Ta a'/b'gliadin 8233
    - EP14004 Ta a'/b'gliadin 8142
    - EP24010 Ta g' gliadin B
    - EP35007 As avenin g' AV45-X1

Homology group 3: Solanaceae RUBISCO small chain genes group 1

    + EP14009 Ph RuBPCss 8/301
    - EP14010 Ph RuBPCss 11A
    - EP16009 Nt RuBPCss Ntss23
    - EP23011 Ph RuBPCss 911
    - EP23012 Ph RuBPCss 611
    - EP24004 Np RuBPCss 8B
    - EP32007 Nt RuBPCss 3-8

Homology group 4: Leguminous lectins.

    + EP14007 Pv[dlec2] PHA-L
    - EP14006 Pv[dlec1] PHA-E
    - EP24008 Pv lectin L134

Homology group 5: Nematode (Caenorhabditis) vitellogenins

    + EP11014 Ce vitellogenin 5
    - EP11015 Ce vitellogenin 4

Homology group 6: Drosphila cuticle proteins group 1.

    + EP07017 Dm cuticle p. I
    - EP11018 Dm cuticle p. II

Homology group 7: Drosophila salivary glue proteins sgs-7/8

    + EP11022 Dm glue p. sgs-7
    - EP11023 Dm glue p. sgs-8

Homology group 8: Drosophila ADH group 1 adult promoter.

    + EP07025 Dm ADH adult E1P1
    - EP14017 Dse ADH adult E1P1
    - EP14018 Ds ADH adult E1P1
    - EP14019 Dma ADH adult E1P1
    - EP14020 Do ADH adult E1P1

Homology group 9: Drosophila ADH group 1 larval promoter.

    + EP07024 Dm ADH larva E2P2
    - EP14021 Dse ADH larva E2P2
    - EP14022 Ds ADH larva E2P2
    - EP14023 Dma ADH larva E2P2
    - EP14024 Do ADH larva E2P2

Homology group 10: Drosophila ADH group 2

    + EP11036 Dmu ADH-1 (larval)
    - EP11037 Dmu ADH-2 (adult)
    - EP23018 Dmo ADH-1 (larval)
    - EP23019 Dmo ADH-2 (adult)

Homology group 11: Drosophila heat shock protein hsp90 family

    + EP07032 Dm hsp 83K
    - EP11043 Ds hsp 82K
    - EP11044 Dp hsp 82K
    - EP11045 Dv hsp 82K

Homology group 12: Drosophila larval serum proteins.

    + EP11049 Dm LSP 1a'
    - EP11050 Dm LSP 1b'

Homology group 13: Sea urchin early histone H2A

    + EP07040 Pm histone H2A early
    - EP11058 Sd histone H2A early
    - EP33006 Pl histone H2A early

Homology group 14: Sea urchin early histone H2B

    + EP11060 Pm histone H2B early
    - EP07041 Sp histone H2B early
    - EP11059 Pm histone H2B early

Homology group 15: Sea urchin early histone H3

    + EP07042 Sp histone H3 early
    - EP11061 Pm histone H3 early
    - EP11062 Sd histone H3 early
    - EP33005 Pl histone H3 early

Homology group 16: Sea urchin early histone H4

    + EP11063 Pm histone H4 early
    - EP07043 Sp histone H4 early
    - EP11064 Sd histone H4 early

Homology group 17: Mammalian, avian histone H1 genes group 1

    + EP11065 Gg histone H1-d 02
    - EP07047 Gg histone H1-c` 01
    - EP27002 Gg histone H1-a 11L
    - EP27003 Gg histone H1-a` 11R
    - EP27004 Gg histone H1-b 03
    - EP27005 Gg histone H1-c .10
    - EP33001 Cm histone H1
    - EP48019 Mm histone H1-E

Homology group 18: Avian histone H5

    + EP11067 Gg histone H5
    - EP11066 Cm histone H5

Homology group 19: Mammalian, avian beta-actin.

    + EP17045 Hs b'-actin
    - EP07061 Gg b'-actin
    - EP07062 Rn b'-actin

Homology group 20: Avian fast-white myosins heavy chain

    + EP11081 Gg myosin EFW1
    - EP11080 Gg myosin AFW1

Homology group 21: Rodent alpha-crystallin.

    + EP11084 Mm a'-crystallin
    - EP14033 Ma a'A-crystallin
    - EP59009 Se a'A-crystallin

Homology group 22: Rodent gamma-crystallin

    + EP14034 Rn g'E-crystallin
    - EP11085 Mm g'F-crystallin
    - EP60007 Rn g'A-crystallin
    - EP60009 Rn g'C-crystallin
    - EP60010 Rn g'D-crystallin

Homology group 23: Rodent gamma-fibrinogen

    + EP11087 Hs g'-fibrinogen
    - EP07094 Rn g'-fibrinogen

Homology group 24: Chicken ovalbumin family

    + EP07082 Gg ovalbumin
    - EP07083 Gg (ovalb.) gene X
    - EP07084 Gg (ovalb.) gene Y

Homology group 25: Xenopus vitellogenins A, B

    + EP07088 Xl vitellogenin A2
    - EP14036 Xl vitellogenin A1
    - EP14037 Xl vitellogenin B1
    - EP14038 Xl vitellogenin B2

Homology group 26: Rodent whey acidic protein

    + EP14040 Rn whey acidic. p.
    - EP11089 Mm whey acidic p.

Homology group 27: Mammalian myoglobin.

    + EP11091 Hs MB
    - EP07070 Hg myoglobin
    - EP14041 Mm myoglobin

Homology group 28: Xenopus alpha globin family

    + EP11092 Xl a'I-globin
    - EP11093 Xl a'II-globin

Homology group 29: Avian alpha-D globin

    + EP11095 Gg a'D-globin
    - EP11094 Cm a'D-globin

Homology group 30: Mammalian alpha globin

    + EP11096 Oc a'-globin
    - EP07071 Hs a'1-globin
    - EP11097 Ec a'-globin
    - EP17053 Pa a'-globin
    - EP53001 Hs a'2-globin

Homology group 31: Mammalian zeta globin

    + EP14043 Pt z'1-globin
    - EP11098 Hs z'-globin
    - EP14042 Mm z'-globin
    - EP24035 Ch z'-globin
    - EP30027 Ec z'-globin

Homology group 32: Mammalian beta-like globins group 1.

    + EP11104 Hs b'-globin
    - EP07073 Oc b'1-globin
    - EP11099 Bt b'-globin
    - EP11100 Mm b'^min-globin
    - EP11101 Ch b'A-globin
    - EP11102 Ch b'C-globin
    - EP11103 Ch g'-globin
    - EP11105 Hs d'-globin
    - EP11106 Bt g'-globin
    - EP14044 Pt b'-globin
    - EP17054 Leu b'-globin
    - EP17055 Mc b'-globin
    - EP23010 Mm b'^maj-globin
    - EP25087 Ag d'globin

Homology group 33: Mammalian beta-like globins group 2

    + EP07074 Oc b'3-globin
    - EP07077 Hs ^Ag'-globin
    - EP11107 Hs ^Gg'-globin
    - EP11108 Ch e'-I globin
    - EP11109 Ch e'-II globin
    - EP11110 Hs e'-globin
    - EP14045 Ggo ^Ag'-globin
    - EP14046 Pt ^Ag'-globin
    - EP17056 Pt ^Gg'-globin
    - EP17057 Pp e'-globin
    - EP59007 Ggo ^Gg'-globin

Homology group 34: Rodent tyrosine aminotransferase (TAT)

    + EP14049 Mm TAT
    - EP07079 Rn TAT

Homology group 35: Mammalian dihydrofolate reductase (DHFR).

    + EP07056 Hs DHFR
    - EP07057 Mm DHFR P2+

Homology group 36: Mammalian aldolase B

    + EP11119 Hs aldolase B
    - EP11118 Rn aldolase B

Homology group 37: Mouse kallikrein - nerve growth factor family

    + EP07096 Mm mGK-1
    - EP14051 Mm mGK-3/g'-NGF
    - EP14052 Mm mGK-4/a'-NGF
    - EP25022 Mm mGK-5
    - EP25023 Mm mGK-6 (renal)

Homology group 38: Mammalian urokinase (uPA)

    + EP14053 Ss urokinase (uPA)
    - EP14054 Hs urokinase (uPA)

Homology group 39: Mammalian alpha amylase

    + EP07097 Mm Amy-2^a I panc.
    - EP14055 Mm Amy-2^a II panc.
    - EP30086 Hs AMY2A
    - EP30087 Hs AMY2A

Homology group 40: Mammalian preprovasopressin

    + EP07100 Rn preprovasopressin
    - EP11123 Bt preprovasopressin

Homology group 41: Mammalian CG/LH/FSH/TSH common alpha chain

    + EP11126 Bt CG/LH/FSH/TSH a'
    - EP07106 Hs CG/LH/FSH/TSH a'

Homology group 42: Mammalian luteinizing hormone.

    + EP30075 Rn LH b'
    - EP11127 Hs LH b'
    - EP11128 Bt LH b'
    - EP30076 Ss LH b'

Homology group 43: Mammalian prolactin

    + EP14056 Hs prolactin
    - EP07103 Bt prolactin
    - EP11124 Rn prolactin

Homology group 44: Mammalian growth hormone

    + EP07104 Rn growth hormone
    - EP11125 Hs growth hormone

Homology group 45: Mammalian insulin.

    + EP07109 Hs insulin
    - EP11131 Rn insulin I
    - EP17068 Mm insulin I
    - EP17069 Mm insulin II
    - EP17070 Rn insulin II
    - EP25046 Atr insulin

Homology group 46: Mammalian interferon alpha family

    + EP07111 Hs LeIF-J (IFN-a'7)
    - EP11134 Hs IFN l'2c1 (-a'17)
    - EP11135 Hs IFN l'2h (-a'14)
    - EP14058 Hs IFN-a'13
    - EP14059 Hs IFN-a'6
    - EP14060 Hs IFN-a'5
    - EP14061 Hs IFN-a'16
    - EP14062 Hs IFN-a'4b
    - EP17073 Mm IFN-a'1
    - EP17074 Mm IFN-a'2
    - EP17075 Mm IFN-a'4
    - EP17076 Mm IFN-a'5
    - EP17077 Mm IFN-a'6
    - EP24036 Mm IFN-a'7

Homology group 47: Mammalian interleukin-2

    + EP07114 Hs IL-2 (TCGF)
    - EP11136 Mm IL-2 (TCGF)

Homology group 48: Mammalian interleukin-3

    + EP14064 Mm IL-3 (multi-CSF)
    - EP14065 Rn IL-3 (multi-CSF)

Homology group 49: Mammalian GM-CSF

    + EP11138 Mm GM-CSF
    - EP11137 Hs GM-CSF

Homology group 50: Mammalian c-sis proto-oncogene

    + EP11139 Hs c-sis (PDGF2)
    - EP11140 Fs c-sis (PDGF2)

Homology group 51: Mammalian c-fos proto-oncogene.

    + EP11145 Hs FOS
    - EP11144 Mm c-fos

Homology group 52: Mammalian c-myc proto-oncogene, promoter 1.

    + EP11146 Hs c-myc P1
    - EP14066 Mm c-myc P1
    - EP16061 Rn c-myc P1

Homology group 53: Mammalian c-myc proto-oncogene, promoter 2.

    + EP11148 Hs c-myc P2+
    - EP14067 Mm c-myc P2+
    - EP16062 Rn c-myc P2+

Homology group 54: Murine Ig heavy chains group 1

    + EP07115 Mm Ig VH101
    - EP11150 Mm Ig VH141

Homology group 55: Murine Ig heavy chains group 2

    + EP11151 Mm Ig VH10
    - EP14071 Mm Ig VH4a-3
    - EP14072 Mm Ig VH4b-3
    - EP14074 Mm Ig V_NP P2+

Homology group 56: Mammalian Ig kappa chains group 1

    + EP07117 Hs Ig k' HK101
    - EP11152 Mm Ig k' K2
    - EP29001 Hs Ig k' HK122

Homology group 57: Mammalian Ig kappa chains subgroup 2

    + EP07118 Mm Ig k' T
    - EP11153 Mm Ig k' K41
    - EP11154 Mm Ig k' MOPC41

Homology group 58: Murine class I MHC genes

    + EP14075 Mm MHCI H-2K^b
    - EP11156 Mm MHCI H-2L^d
    - EP11157 Mm MHCI Q10

Homology group 59: Rat seminal vesicle proteins.

    + EP14078 Rn sem-v. gene F
    - EP14079 Rn SVS IV

Homology group 60: Murine retrovirus like 30s RNA.

    + EP14082 Mm VL30 NVL-3 LTR
    - EP14083 Mm VL30 VL3 LTR

Homology group 61: Mammalian type C virus group.

    + EP07123 M-MLV LTR
    - EP11165 F-MCF LTR
    - EP11166 M-MSV LTR
    - EP11168 GA-FeLV LTR
    - EP16073 MLV_AKV LTR
    - EP16074 MLVxeno LTR
    - EP16077 GALV LTR
    - EP16078 SSV LTR_A
    - EP79001 SSV LTR_B

Homology group 62: Avian type C retrovirus group.

    + EP07126 RSV LTR
    - EP11170 ALV LTR
    - EP11171 RAV2 LTR
    - EP11172 Gg[ev1] LTR

Homology group 63: Nematode (Caenorhabditis elegans)

    + EP33004 Ce hist.H2A-A his-12
    - EP55001 Ce hist.H2A-B his-12
    - EP55003 Ce hist.H2A-D his-12

Homology group 64: Herpes simplex virus immediate early II.

    + EP07129 HSV-1 IE-II
    - EP11175 HSV-2 IE-II

Homology group 65: Herpes simplex virus immediate early III.

    + EP07130 HSV-1 IE-III
    - EP11176 HSV-2 IE-III

Homology group 66: Herpes simplex virus immediate early IV/V.

    + EP11177 HSV-2 IE-IV/V
    - EP07131 HSV-1 IE-IV/V

Homology group 67: Herpes simplex virus ribonucleotide reductase.

    + EP07135 HSV-1 b' RNR2
    - EP11181 HSV-2 b' RNR2

Homology group 68: Adenovirus early EIa promoter.

    + EP07149 Ad2 EIa
    - EP11195 Ad5 EIa
    - EP11196 Ad7 EIa
    - EP11197 Ad12 E1a P2
    - EP17110 SA7P EIa

Homology group 69: Adenovirus early EIb promoter.

    + EP07150 Ad2 EIb
    - EP11198 Ad5 EIb

Homology group 70: Adenovirus early EIII promoter.

    + EP07154 Ad2 EIII
    - EP11199 Ad5 EIII

Homology group 71: Adenovirus intermediate IVa2 promoter.

    + EP07156 Ad2 IVa2
    - EP11200 Ad5 IVa2
    - EP11201 Ad7 IVa2

Homology group 72: Adenovirus intermediate IX promoter.

    + EP07157 Ad2 IX
    - EP11202 Ad5 IX

Homology group 73: Adenovirus major late promoter.

    + EP07159 Ad2 major late
    - EP11203 Ad5 major late
    - EP11204 Ad7 major late
    - EP26036 Ad12 major late

Homology group 74: SV40/BKV early promoter 2.

    + EP07164 SV40 T/t early P2
    - EP11213 BKV T/t early

Homology group 75: Orthohepadnavirus 3.5 kb RNA promoter 1.

    + EP11218 GSHV 3.5 kb P1+
    - EP11217 HBV(adr4) 3.6 kb P1

Homology group 76: Orthohepadnavirus 3.5 kb RNA promoter 2.

    + EP11215 HBV(adr4) 3.6 kb P2
    - EP11216 GSHV 3.5 kb P2

Homology group 77: Orthohepadnavirus 2.2 kb RNA promoter 1.

    + EP11219 HBV(adr4) 2.2 kb P1
    - EP11220 GSHV 2.3 kb P1

Homology group 78: Soybean nodulin

    + EP15004 Gm nodulin 20K
    - EP11008 Gm nodulin 23K
    - EP15005 Gm nodulin 22K

Homology group 79: Drosophila heat shock locus hsr-omega.

    + EP11046 Dm[93D] (hs locus)
    - EP15020 Dh[48B] (hs locus)

Homology group 80: Mammalian alpha-casein

    + EP15030 Rn a'-casein
    - EP11090 Bt a's1-casein

Homology group 81: Mammalian renin

    + EP29023 Rn renin
    - EP15035 Mm renin-1
    - EP15036 Mm renin-2
    - EP16056 Hs renin

Homology group 82: Mammalian class II histocomp. antigen gamma.

    + EP14076 Hs CD74
    - EP16069 Mm Ia-ass. g' (Ii)

Homology group 83: Mammalian pronatriodilatin

    + EP11132 Hs pronatriodilatin
    - EP11133 Mm pronatriodilatin

Homology group 84: Sea urchin early histone H1

    + EP07039 Pm histone H1 early
    - EP11057 Sp histone H1 early

Homology group 85: Leguminous leghemoglobin

    + EP35071 Sr leghem. Srglb2
    - EP07006 Gm leghem. Lbc_3
    - EP16005 Gm leghem. Lba
    - EP16006 Gm leghem. Lbc_1
    - EP16007 Gm leghem. Lbc_2
    - EP29010 Pv leghemoglobin
    - EP35072 Sr leghem. Srglb3

Homology group 86: Leguminous RUBISCO group 2

    + EP16011 Ps RuBPCss E9
    - EP07005 Gm RuBPCss
    - EP16010 Gm RuBPCss SRS4
    - EP16012 Ps RuBPCss 3A

Homology group 87: Soybean class 1 HSP20 genes

    + EP30031 Gm hsp 17.5-M
    - EP07007 Gm hsp 17.3-B
    - EP16019 Gm hsp 17.5-E
    - EP30032 Gm hsp 17.6-L

Homology group 88: Sea urchin protease inhibitor I

    + EP15003 Le protease inh. I
    - EP16020 St protease inh. I
    - EP35028 Lpe protease inh. I

Homology group 89: Midge globin IV/VII

    + EP07021 Ct globin IV
    - EP16022 Ct globin VIIB-4
    - EP37002 Ct globin VIIB-5
    - EP37003 Ct globin VIIB-6
    - EP37004 Ct globin VIIB-7

Homology group 90: Mammalian serum albumin.

    + EP16042 Hs ALB
    - EP16040 Rn serum albumin
    - EP16041 Mm serum albumin

Homology group 91: Mammalian prealbumin

    + EP28007 Rn prealbumin
    - EP16043 Mm prealbumin
    - EP16044 Hs prealbumin

Homology group 92: Mammalian alpha-fetoprotein

    + EP17052 Rn a'-fetoprotein
    - EP16045 Mm a'-fetoprotein
    - EP16046 Hs a'-fetoprotein

Homology group 93: Mammalian cytoplasmic HMG-CoA reductase.

    + EP16050 Hs HMG-CoA red.
    - EP16051 Ma HMG-CoA red.

Homology group 94: Mammalian somatostatin

    + EP16058 Hs somatostatin I
    - EP16057 Rn somatostatin

Homology group 95: Murine proliferin

    + EP16059 Mm proliferin 42
    - EP16060 Mm proliferin 149

Homology group 96: Human T-cell leukemia virus I/II LTR.

    + EP07124 HTLV-I LTR
    - EP16080 HTLV-II LTR

Homology group 97: Primate lentivirus group: HIV-2, SIV, SRV-1 LTR.

    + EP16081 HIV-2 LTR
    - EP16082 SRV-1 LTR
    - EP16083 SIV LTR

Homology group 98: Leguminous snRNA 1

    + EP17001 Pv snRNA U1
    - EP17002 Gm snRNA U1a
    - EP17003 Gm snRNA U1b

Homology group 99: Barley alpha-amylase 2, Type A.

    + EP17008 Hv a'amylase 32b
    - EP16018 Hv a'-amylase 2

Homology group 100: Silk moth fibroin

    + EP17015 Ay fibroin b'3a
    - EP07036 Bm fibroin

Homology group 101: Drosophila Ultrabithorax gene

    + EP17017 Dm[Ubx]
    - EP15015 Df[Ubx]

Homology group 102: Sea urchin snRNA U1

    + EP17020 Lv snRNA U1.1
    - EP17019 Lv snRNA U1.2

Homology group 103: Sea urchin late histone H1

    + EP16031 Sp histone H1 g'late
    - EP17021 Lp histone H1 late
    - EP30013 Sp histone H1 b'late

Homology group 104: Tetrapod snRNA U1 genes, group 1

    + EP17028 Mm snRNA U1a
    - EP17024 Xl snRNA U1 minor
    - EP26021 Xl snRNA U1b1

Homology group 105: Tetrapod snRNA U1 genes, group 2

    + EP17029 Mm snRNA U1b
    - EP17025 Gg snRNA U1 52a
    - EP17026 Gg snRNA U1 52b
    - EP17027 Gg snRNA U1 52c
    - EP17030 Hs snRNA U1 (pU1-6)
    - EP17031 Hs snRNA U1 (pHU1-1)
    - EP23016 Rn snRNA U1 6-6(A)
    - EP23017 Rn snRNA U1 6-6(B)
    - EP24011 Rn snRNA U1 18-5
    - EP24012 Rn snRNA U1 3-1(A)
    - EP26022 Xl snRNA U1b2

Homology group 106: Mammalian, avian snRNA U2.

    + EP17036 Hs snRNA U2
    - EP17033 Gg snRNA U2
    - EP17034 Mm snRNA U2
    - EP17035 Rn snRNA U2

Homology group 107: Mammalian snRNA U3

    + EP17037 Rn snRNA U3A'
    - EP17038 Rn snRNA U3B
    - EP17039 Hs snRNA U3

Homology group 108: Mammalian snRNA U4

    + EP17040 Gg snRNA U4B
    - EP17041 Hs snRNA U4C

Homology group 109: Trout protamine

    + EP17043 Sg protamine C_II
    - EP07046 Sg protamine TP14

Homology group 110: Mammalian fibronectin

    + EP16038 Hs fibronectin
    - EP17049 Rn fibronectin

Homology group 111: Mammalian cytochrome P450 IA1

    + EP11121 Hs P450 IA1 +TCDD
    - EP17065 Rn P450 IA1 +MC
    - EP24034 Hs P450 IA1 +MC

Homology group 112: Mammalian glucagon.

    + EP17067 Hs glucagon
    - EP17066 Rn glucagon

Homology group 113: Mammalian G-CSF

    + EP17083 Hs G-CSF
    - EP17082 Mm G-CSF

Homology group 114: Mammalian, avian HSP70 family.

    + EP17089 Hs HSPA8
    - EP15051 Rn hsc 73K
    - EP24017 Gg hsp 70K

Homology group 115: Human T-cell receptor v-beta-8 family

    + EP17093 Hs TCR vb'8.1
    - EP17094 Hs TCR vb'8.2

Homology group 116: Arabidopsis snRNA U2.

    + EP24016 Ath snRNA U2.5
    - EP24014 Ath snRNA U2.2
    - EP24015 Ath snRNA U2.3

Homology group 117: Rodent urinary proteins

    + EP17098 Rn a'2u-globulin P01
    - EP11162 Mm MUP(I)3 BL6-3
    - EP17099 Rn a'2u-globulin O01
    - EP24030 Mm MUP(I)2 BL6-51
    - EP24031 Mm MUP(I)4 BL6-42

Homology group 118: Herpes simplex virus glycoprotein gD

    + EP11183 HSV-1 b' gD
    - EP17104 HSV-2 b' gD

Homology group 119: Mammalian interleukin-1b.

    + EP17079 Hs IL1B
    - EP17078 Mm IL-1b'

Homology group 120: Herpes simplex virus thymidine kinase.

    + EP07136 HSV-1 b' tk
    - EP17103 HSV-2 b' tk

Homology group 121: Mammalian DNA polymerase beta

    + EP16049 Mm DNA polymerase b'
    - EP23014 Rn DNA pol b' P1

Homology group 122: Mammalian beta-interferon

    + EP23039 Mm b'-interferon
    - EP07112 Hs b'-interferon

Homology group 123: Drosophila pupal cuticle protein.

    + EP23027 Dm[Gart] cuticle p.
    - EP23028 Dp[Gart] cuticle p.

Homology group 124: Xenopus cardiac alpha-2-actin.

    + EP23037 Xl a'2-actin cardiac
    - EP23038 Xt a'2-actin cardiac

Homology group 125: Mammalian, avian alpha-2 type I collagen

    + EP07066 Gg a'2(I) collagen
    - EP24025 Hs a'2(I) collagen
    - EP24026 Mm a'2(I) collagen

Homology group 126: Mammalian, avian myosin light chain 1.

    + EP24037 Rn myosin LC1_f P1
    - EP07063 Gg myosin LC1 P1

Homology group 127: Mammalian tumor necrosis factor beta

    + EP11159 Hs TNF-b'
    - EP24027 Mm TNF-b'
    - EP37009 Oc TNF-b'
    - EP37010 Ss TNF-b'

Homology group 128: Bombyx mori chorion proteins group 1

    + EP25056 Bm chorion p. A.L10
    - EP25051 Bm chorion p. A.L3
    - EP25052 Bm chorion p. A.L5
    - EP25053 Bm chorion p. A.L6
    - EP25054 Bm chorion p. A.L8
    - EP25055 Bm chorion p. A.L9
    - EP25057 Bm chorion p. A.L14

Homology group 129: Bombyx mori chorion proteins group 2

    + EP25064 Bm chorion p. HcA.12
    - EP07037 Bm chorion p. HcA.13
    - EP25058 Bm chorion p. A.L2
    - EP25059 Bm chorion p. A.R2
    - EP25060 Bm chorion p. A.R3
    - EP25061 Bm chorion p. A.X1
    - EP25062 Bm chorion p. A.X2
    - EP25063 Bm chorion p. A.X3

Homology group 130: Bombyx mori chorion proteins group 3

    + EP25080 Bm chorion p. HcB.12
    - EP07038 Bm chorion p. HcB.13
    - EP25065 Bm chorion p. B.L3
    - EP25066 Bm chorion p. B.L5
    - EP25067 Bm chorion p. B.L6
    - EP25068 Bm chorion p. B.L8
    - EP25069 Bm chorion p. B.L9
    - EP25070 Bm chorion p. B.L10
    - EP25071 Bm chorion p. B.L14
    - EP25072 Bm chorion p. B.L2
    - EP25073 Bm chorion p. B.R2
    - EP25074 Bm chorion p. B.R3
    - EP25075 Bm chorion p. B.X1
    - EP25076 Bm chorion p. B.X2
    - EP25077 Bm chorion p. B.X3
    - EP25078 Bm chorion p. B.L4
    - EP25079 Bm chorion p. B.L13

Homology group 131: Locust vitellogenins

    + EP26002 Lm vitellogenin A
    - EP26003 Lm vitellogenin B

Homology group 132: Sea urchin late embryonic histone H4

    + EP07045 Lp histone H4 late
    - EP25027 Sp hist. H4 late L1

Homology group 133: Mammalian skeletal muscle alpha actin.

    + EP25005 Hs a'-actin skel-m.
    - EP07060 Rn a'-actin skel-m.

Homology group 134: Mammalian alpha 1 type I collagen.

    + EP25034 Hs a'1(I) collagen
    - EP07067 Mm a'1(I) collagen

Homology group 135: Mammalian ferritin heavy chain

    + EP25047 Mm ferritin H
    - EP11112 Hs ferritin H
    - EP29014 Rn ferritin H

Homology group 136: Mammalian POMC

    + EP25006 Rn POMC (ACTH,b'LPH)
    - EP07105 Hs POMC (ACTH,b'LPH)
    - EP25007 Mm POMC (ACTH,b'LPH)
    - EP29009 Bt COLI (ACTH/b'LPH)

Homology group 137: Mammalian insulin-like growth factor 2 E2/E3.

    + EP25032 Rn IGF II E2P2
    - EP17072 Hs IGF II E3P3

Homology group 138: Mammalian metallothionein

    + EP25036 Hs MT-IB
    - EP07054 Mm MT-I
    - EP30057 Hs MT-IA
    - EP30058 Hs MT-IE
    - EP30059 Hs MT-IF
    - EP37011 Hs MT-IG

Homology group 139: Mammalian tropomyosin alpha

    + EP25016 Cco TM-a'(sk-m. a')
    - EP25017 Rn TM-a' (sk-m. a')

Homology group 140: Mammalian tropomyosin beta

    + EP25018 Gg TM-b' (sk-m. b')
    - EP25019 Rn TM-b' (sk-m. b')

Homology group 141: Mammalian vimentin

    + EP24039 Hs vimentin
    - EP25003 Ma vimentin

Homology group 142: Mammalian alpha 1 type III collagen

    + EP25041 Hs a'1(III) collagen
    - EP25040 Mm a'1(III) collagen

Homology group 143: Mammalian ferritin light chain

    + EP25048 Rn ferritin L
    - EP25049 Hs ferritin L

Homology group 144: Mammalian adenine phosphoribosyltransferase

    + EP25001 Ma APRT
    - EP25004 Cgr APRT

Homology group 145: Mammalian interleukin-5

    + EP25045 Mm IL-5 (EDF/TRF)
    - EP25044 Hs IL-5 (EDF/TRF)

Homology group 146: Mammalian rhodopsin

    + EP25083 Hs rhodopsin
    - EP25082 Bt rhodopsin

Homology group 147: Mammalian red, green opsins

    + EP25086 Hs opsin green
    - EP25085 Hs opsin red

Homology group 148: Mammalian aldolase A E1/E3.

    + EP26016 Hs ALDOA E3P2
    - EP17061 Rn aldolase A E1P1

Homology group 149: Mammalian aldolase A E2/E4 promoter 1.

    + EP26017 Hs ALDOA E4P3
    - EP17062 Rn aldolase A E2P2

Homology group 150: Mammalian aldolase A E2/E4 promoter 2.

    + EP26018 Hs ALDOA E4P4
    - EP17063 Rn aldolase A E2P3

Homology group 151: Mammalian interleukin-4

    + EP15039 Mm IL-4 (BSF-1)
    - EP26038 Hs IL-4 (BSF-1)

Homology group 152: Human papillomavirus E6/E7.

    + EP15061 HPV18 E6 P2+
    - EP26033 HPV16 E6/E7

Homology group 153: Mammalian alpha 1-acid glycoprotein.

    + EP60006 Hs a'1-AGP2 B
    - EP16070 Hs a'1-AGP1 A
    - EP27014 Rn a'1-AGP

Homology group 154: Mammalian protamin P1

    + EP28006 Bt protamine P1^1.1
    - EP33030 Ss protamine P1
    - EP33037 Hs protamine P1
    - EP59008 Mm protamine P1

Homology group 155: Mammalian insulin-like growth factor 2 E3/E4.

    + EP25033 Rn IGF II E3P3+
    - EP28009 Hs IGF II E4P4

Homology group 156: Mammalian calcitonin gene

    + EP29003 Rn calcitonin/CGRP
    - EP29004 Hs calcitonin/a'CGRP

Homology group 157: Mammalian elastase II

    + EP29006 Rn elastase II
    - EP16055 Mm elastase II

Homology group 158: Mammalian alpha cardiac actin.

    + EP29015 Mm a'-cardiac actin
    - EP16033 Hs a'-cardiac actin

Homology group 159: Mammalian beta 2-adrenergic receptor

    + EP29017 Mm b'2-AR
    - EP25039 Hs b'2-AR

Homology group 160: Mammalian trypsins

    + EP29018 Rn trypsin I
    - EP16054 Mm trypsin a
    - EP32006 Rn trypsin II

Homology group 161: Mammalian glutathione S-transferase

    + EP26004 Mm GST Ya
    - EP30001 Rn GST Ya

Homology group 162: Mammalian N-ras gene

    + EP30003 Hs c-N-ras
    - EP30002 Mm c-N-ras
    - EP31001 Cp c-N-ras

Homology group 163: Mammalian beta-casein

    + EP30006 Oc b'-casein
    - EP30004 Mm b'-casein
    - EP30005 Rn b'-casein
    - EP30007 Bt b'-casein

Homology group 164: Rat tyrosine hydroxylase

    + EP30008 Hs TH
    - EP15033 Rn TH

Homology group 165: Mammalian preprotachykinin

    + EP11122 Bt preprotachykinin
    - EP30009 Rn preprotachykinin

Homology group 166: Sea urchin early U2 snRNA

    + EP30010 Sp snRNA U2 early
    - EP30011 Lv snRNA U2 early

Homology group 167: Mammalian apolipoprotein AI.

    + EP30021 Hs apolipop. AI
    - EP30018 Rn apolipop. AI

Homology group 168: Mammalian apolipoprotein CIII

    + EP30019 Rn apolipop. CIII
    - EP30022 Hs apolipop. CIII

Homology group 169: Human pregnancy-specific beta-1-glycoproteins

    + EP30036 Hs PSG5
    - EP30035 Hs PSG1 (PSb'G)

Homology group 170: Mammalian corticotropin-releasing factor.

    + EP30037 Oa CRF
    - EP30038 Rn CRF
    - EP30039 Hs CRF

Homology group 171: Mammalian parathyroid hormone, promoter 1.

    + EP07108 Rn PTH
    - EP30043 Hs PTH P1+
    - EP30045 Bt PTH P1+

Homology group 172: Mammalian parathyroid hormone, promoter 2

    + EP30046 Bt PTH P2
    - EP30044 Hs PTH P2

Homology group 173: Mammalian transin/stromelysin

    + EP15037 Rn transin
    - EP30051 Hs stromelysin
    - EP30052 Oc stromelysin

Homology group 174: Mammalian collagenase.

    + EP15034 Hs collagenase
    - EP30053 Oc collagenase

Homology group 175: Mammalian arginase.

    + EP30054 Hs arginase liver
    - EP30048 Rn arginase liver

Homology group 176: Potato patatins.

    + EP11009 St patatin I l'PAT21
    - EP30063 St patatin I PS20
    - EP30064 St patatin II pgT5

Homology group 177: Mammalian kreatine kinase B.

    + EP30047 Hs CKB
    - EP30066 Rn creatine kinase B

Homology group 178: Mammalian thyrotropin beta chain, promoter 1

    + EP30069 Rn TSH b' P1
    - EP30067 Mm TSH b' P1

Homology group 179: Mammalian thyrotropin beta chain, promoter 2

    + EP30071 Hs TSH b'
    - EP30068 Mm TSH b' P2+
    - EP30070 Rn TSH b' P2+

Homology group 180: Mammalian follicle stimulating hormone

    + EP33036 Ss FSH b'
    - EP30072 Rn FSH b'
    - EP30073 Bt FSH b'
    - EP30074 Hs FSH b'

Homology group 181: Mammalian thyrotropin-releaseing hormone

    + EP30077 Rn THYL
    - EP30078 Hs THYL

Homology group 182: Avian beta-like globins group 1

    + EP07075 Gg b'-globin
    - EP30080 Ap b'-globin
    - EP30081 Cm b'-globin

Homology group 183: Avian beta-like globins group 2

    + EP07076 Gg e'-globin
    - EP30082 Gg r'-globin

Homology group 184: Murine intracisternal A-particles LTR.

    + EP14081 Mm IAP LTR MIA14
    - EP31002 Mm IAP LTR IAP81

Homology group 185: Mammalian, avian HMG-17 protein.

    + EP31009 Hs HMG-17
    - EP31006 Gg HMG-17

Homology group 186: Mammalian cytosolic aspartate aminotransferase

    + EP32004 Rn AspAT cs
    - EP32003 Mm AspAT cs

Homology group 187: Mammalian cytokeratins group 1

    + EP11082 Bt cytokeratin VIb
    - EP32005 Mm keratin I 59K

Homology group 188: Avian H2B genes group 1

    + EP24013 Gg histone H2B-I
    - EP33002 Cm histone H2B

Homology group 189: Sea urchin ectoderm enriched type 2 RNAs

    + EP33009 Sp Spec2c
    - EP33008 Sp Spec2a
    - EP33010 Sp Spec2d

Homology group 190: Mammalian desmin.

    + EP33011 Hs DES
    - EP26034 Ma desmin

Homology group 191: Sea urchin metallothioneins

    + EP33014 Sp MTB 1
    - EP33013 Sp MTA

Homology group 192: Mammalian transition protein 1.

    + EP33023 Hs TNP1
    - EP33021 Rn TP1
    - EP33022 Ss TP1

Homology group 193: Mammalian transition protein 2

    + EP33024 Mm TP2
    - EP33025 Ss TP2
    - EP33026 Bt TP2

Homology group 194: Avian H4 genes group 1

    + EP07050 Gg histone H4-I
    - EP33031 Gg histone H4-II

Homology group 195: Avain alpha-like globin genes

    + EP33032 Gg a'A-globin
    - EP33033 Cm a'A-globin

Homology group 196: Mammalian protamine P2.

    + EP33038 Hs PRM2
    - EP33029 Mm protamine P2

Homology group 197: Mammalian H19 gene

    + EP35001 Mm H19
    - EP35004 Hs H19

Homology group 198: Leguminous bean storage proteins.

    + EP35015 Cg canavalin
    - EP07009 Pv b'-phaseolin
    - EP35063 Pv a'-phaseolin
    - EP35066 Ps convicilin cvcA
    - EP35069 Gm b'-conglyc. a''

Homology group 199: Mammalian P-glycoprotein 1a.

    + EP35012 Hs P-glycoprotein 1
    - EP35017 Mm P-glycoprotein 1a

Homology group 200: Leguminous light-harvesting cab3 genes.

    + EP35026 Gm LHC cab3
    - EP35025 Gm LHC cab3

Homology group 201: Cruciferous light-harvesting cab2 genes.

    + EP35023 Sa LHC cab
    - EP11003 Ath LHC II AB180

Homology group 202: Solanaceae NADH-specific nitrate reductase.

    + EP35041 Nt NR/NADH nia-2 Ns
    - EP35040 Nt NR/NADH nia-1 Nto
    - EP35042 Le NR NADH-spec.

Homology group 203: Tobacco 1,3-beta-glucanase

    + EP35044 Nt 1,3-b'glucanase B
    - EP35043 Nt 1,3-b'glucanase A

Homology group 204: Mammalian cytochrome XVIIA1

    + EP35052 Rn P450 XVIIA1 CYP17
    - EP35053 Ss P450 XVIIA1 CYP17
    - EP35073 Hs P450 XVIIA1 CYP17

Homology group 205: Potato phenylalanine ammonia-lyase-2

    + EP35060 St PAL-1
    - EP35061 St PAL-2

Homology group 206: Pea legumins

    + EP14005 Ps legumin legA
    - EP35067 Ps min. legumin LegJ
    - EP58010 Ps legumin legB
    - EP58011 Ps legumin legC

Homology group 207: Mammalian angiotensin.

    + EP36006 Hs AGT P3
    - EP36005 Rn angiotensin

Homology group 208: Mammalian apolipoprotein E.

    + EP36007 Hs apolipoprotein E
    - EP36008 Rn apolipoprotein E

Homology group 209: Human CEA/NCA.

    + EP36009 Hs CEA
    - EP36010 Hs NCA

Homology group 210: Mammalian tristetraproline.

    + EP36011 Mm nuclear p. Nup475
    - EP36012 Hs G0S24

Homology group 211: Mammalian tumor necrosis factor alpha

    + EP11158 Hs TNF-a'
    - EP36013 Mm TNF-a'
    - EP36014 Oc TNF-a'
    - EP37008 Ss TNF-a'

Homology group 212: Mammalian nucleolin

    + EP36015 Mm nucleolin
    - EP36016 Rn nucleolin
    - EP36017 Cgr nucleolin
    - EP36018 Hs nucleolin

Homology group 213: Mammalian colony stimulating factor 1

    + EP37007 Mm CSF-1
    - EP37006 Hs CSF-1

Homology group 214: Mammalian, avian ribosomal protein S15

    + EP37012 Gg[rig] rp S15
    - EP37013 Rn[rig] rp S15

Homology group 215: Mammalalian ornithine aminotransferase.

    + EP30056 Hs OAT
    - EP37015 Rn OAT

Homology group 216: Trout metallothionein genes

    + EP41002 Sg MT-A
    - EP41003 Sg MT-B

Homology group 217: Mammalian histone H3 genes group 1.

    + EP11073 Hs histone H3b
    - EP48011 Mm histone H3.2-G

Homology group 218: Nematode (Caenorhabditis elegans)

    + EP33003 Ce hist.H4-A his-10
    - EP55004 Ce hist.H4-B his-10
    - EP55005 Ce hist.H4-C his-10

Homology group 219: Mammalian testicular histone H1 gene

    + EP49001 Hs histone H1t
    - EP49013 Mm histone H1t

Homology group 220: Mammalian testicular histone H4 gene

    + EP49011 Mm histone H4t
    - EP49002 Rn histone H4t
    - EP49012 Hs histone H4t

Homology group 221: Mammalian histone H3 genes group 2

    + EP49003 Mm histone H3.2-615
    - EP49016 Mm histone H3.2-614

Homology group 222: Tetrapod histone H1 (0)

    + EP49008 Xl histone H10
    - EP49009 Mm histone H10

Homology group 223: Rat serine protease inhibitors

    + EP49020 Rn SPI-3
    - EP49018 Rn SPI-1
    - EP49019 Rn SPI-2

Homology group 224: Mammalian tyrosine kinase Lck

    + EP49023 Mm lck 1
    - EP49021 Hs lck P1

Homology group 225: Nematode (Caenorhabditis elegans)

    + EP28002 Ce[IV] msp-56 A
    - EP71002 Ce[IV] msp-56 B

Homology group 226: Nematode (Caenorhabditis elegans)

    + EP17012 Ce hsp 16K-1 A
    - EP17013 Ce hsp 16K-48 A
    - EP55011 Ce hsp 16K-1 B
    - EP55012 Ce hsp 16K-48 B

Homology group 227: Human erythrocyte glycophorins.

    + EP56002 Hs glycophorin A
    - EP56003 Hs glycophorin B
    - EP56004 Hs glycophorin E

Homology group 228: Human haptoglobin

    + EP11111 Hs haptoglob Hp1F
    - EP57001 Hs haptoglob Hp2
    - EP57002 Hs haptoglob HpR

Homology group 229: 4-coumarate coenzyme A ligase.

    + EP16015 Pc 4CL1
    - EP58016 Pc 4CL2

Homology group 230: Barley alpha-amylase 1, type B

    + EP16017 Hv a'-amylase 1
    - EP58017 Hv a'-amylase 1_2
    - EP58018 Hv a'-amylase 1_6

Homology group 231: Parsley phenylalanine ammonia-lyase.

    + EP35057 Pc PAL-1
    - EP58020 Pc PAL-2
    - EP58021 Pc PAL-3

Homology group 232: Human pepsinogen A

    + EP59006 Hs pepsinogen A_B
    - EP28004 Hs pepsinogen A_A

Homology group 233: Mouse GlcNAc-1-phosphate transferase

    + EP59001 Mm GPT P5+
    - EP59004 Mm GPT P2

Homology group 234: Maize anthocyanin regulatory C1 locus.

    + EP29016 Zm[c1]
    - EP60002 Zm[C1-I]

Homology group 235: Proteoglycan link protein.

    + EP60004 Hs link
    - EP60003 Rn link

Homology group 236: Maize alpha zeins 19 kd pMS promoter 2

    + EP58008 Zm zein 19K D P2
    - EP58007 Zm zein 19K C P2

Homology group 237: Invertebrate paramyosin.

    + EP63005 Dm paramyosin E1P2+
    - EP63004 Dm paramyosin E1P1

Homology group 238: Carbonic anhydrase II.

    + EP23006 Gg CA II
    - EP68001 Hs CA2

Explanations

This file is created by extracting information about homology groups from the FP line, which is described in section 4.3.1. of the user manual.

  • The sign in front is the subset status.
  • The following number is the EPD accession number of the entry.
  • The last part is the promoter name.

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Last update Dec. 2016